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Recipes Calculator

Having a lazy day? Select the final volume of the solution that you need and with one click you will have the recipe ready!! This tool provided by CurrentProtocols calculates the volume or weight of the components of a broad number of buffers and solutions commonly used in research in a biomedical laboratory: TAE electropforesis …

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DNA to protein

This online DNA-Protein translator tool outputs the peptide or protein sequence encoded by a DNA sequence. Only A,C,G, and T are accepted (case insensitive). The translation is provided in six reading frames: three forward and three reverse..

QTL

QTL (quantitative trait locus) Qxpak is a versatile mixed model application for genetical genomics and QTL analysis. To download – visit here QTLMap. A software dedicated to the detection of QTL from experimental designs in outbred population. To download -visit here.  

Pedigree Viewer

Pedigree Viewer is a free tool to draw pedigree diagrams and display a large pedigree data of thousands of animals. To dowload Pedidree Viewer -visit here

Research Methods

Internet provides a broad number online resources that could help you on a daily basis research. Here I enclose a few websites that I found really useful in my lab work. Enjoy the protocols and improve your techniques following the advices of experts in the subject. Would you like to share your protocol with the …

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Tandem Repeats Finder

Tandem Repeats Finder in a free software that analyze the DNA sequence to find two or more adjacent, approximate copies of a pattern of nucleotides. Witj this software there is no need to specify the size or pattern sequence. Once you submit a sequence for analysis, in a few seconds you will get two files: …

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Promoter 2.0

Promoter2.0 is a free online tool that predicts transcription start sites of vertebrate Pol II promoters in DNA sequences. To input a sequence: a) paste a single sequence or a number of sequences in FASTA format into the window, or b) upload your FASTA file.

MetDB

DNA methylation database and environmental epigenetic effects – visit here.

CpG island Searcher

CpG island Searcher. CpG islands are generally described as 200-bp stretch of DNA with a C+G content of 50% and an observed CpG/expected CpG in excess of 0.6. CpG islands located in the promoter regions of genes can play important roles in gene silencing and imprinting. With CpG island Searcher you can select the following …

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